Returns taxa and their versions used in Gemma
get_taxa(memoised = getOption("gemma.memoised", FALSE))Whether or not to save to cache for future calls with the
same inputs and use the result saved in cache if a result is already saved.
Doing options(gemma.memoised = TRUE) will ensure that the cache is always
used. Use forget_gemma_memoised to clear the cache.
A data frame including the names, IDs and database information about the taxons
get_taxa()
#> taxon.name taxon.scientific taxon.ID taxon.NCBI taxon.database.name
#> <char> <char> <int> <int> <char>
#> 1: human Homo sapiens 1 9606 hg38
#> 2: mouse Mus musculus 2 10090 mm10
#> 3: rat Rattus norvegicus 3 10116 rn6
#> taxon.database.ID
#> <int>
#> 1: 87
#> 2: 81
#> 3: 86