Index

A

abstract_text (gemmapy.sdk.models.BibliographicReferenceValueObject property) accession (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.DatabaseEntryValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) accessions (gemmapy.sdk.models.GeneValueObject property) action (gemmapy.sdk.models.AuditEventValueObject property) action_name (gemmapy.sdk.models.AuditEventValueObject property) aliases (gemmapy.sdk.models.GeneValueObject property) all_id_of_phenotype (gemmapy.sdk.models.BibliographicPhenotypesValueObject property) analysis (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject property) AnnotationSearchResultValueObject (class in gemmapy.sdk.models) AnnotationValueObject (class in gemmapy.sdk.models) AnnotationWithUsageStatisticsValueObject (class in gemmapy.sdk.models) api_version (gemmapy.sdk.models.ResponseErrorObject property) ApiInfoValueObject (class in gemmapy.sdk.models) array_design (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.CompositeSequenceValueObject property) array_designs_used (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) ArrayDesignValueObject (class in gemmapy.sdk.models) ArrayDesignWithUsageStatisticsValueObject (class in gemmapy.sdk.models) attribute_map (gemmapy.sdk.models.AnnotationSearchResultValueObject attribute) (gemmapy.sdk.models.AnnotationValueObject attribute) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.ApiInfoValueObject attribute) (gemmapy.sdk.models.ArrayDesignValueObject attribute) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.AuditEventValueObject attribute) (gemmapy.sdk.models.BibliographicPhenotypesValueObject attribute) (gemmapy.sdk.models.BibliographicReferenceValueObject attribute) (gemmapy.sdk.models.BioAssayValueObject attribute) (gemmapy.sdk.models.BioMaterialValueObject attribute) (gemmapy.sdk.models.BioSequenceValueObject attribute) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.CharacteristicValueObject attribute) (gemmapy.sdk.models.CitationValueObject attribute) (gemmapy.sdk.models.CompositeSequenceArg attribute) (gemmapy.sdk.models.CompositeSequenceValueObject attribute) (gemmapy.sdk.models.ContrastResultValueObject attribute) (gemmapy.sdk.models.DatabaseEntryArg attribute) (gemmapy.sdk.models.DatabaseEntryValueObject attribute) (gemmapy.sdk.models.Dataset attribute) (gemmapy.sdk.models.Dataset1 attribute) (gemmapy.sdk.models.Dataset10 attribute) (gemmapy.sdk.models.Dataset2 attribute) (gemmapy.sdk.models.Dataset3 attribute) (gemmapy.sdk.models.Dataset4 attribute) (gemmapy.sdk.models.Dataset5 attribute) (gemmapy.sdk.models.Dataset6 attribute) (gemmapy.sdk.models.Dataset7 attribute) (gemmapy.sdk.models.Dataset8 attribute) (gemmapy.sdk.models.Dataset9 attribute) (gemmapy.sdk.models.DatasetArg attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject attribute) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject attribute) (gemmapy.sdk.models.ExperimentalFactorValueObject attribute) (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentSetValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject attribute) (gemmapy.sdk.models.ExternalDatabaseValueObject attribute) (gemmapy.sdk.models.FactorValueBasicValueObject attribute) (gemmapy.sdk.models.FactorValueValueObject attribute) (gemmapy.sdk.models.FilterArgArrayDesign attribute) (gemmapy.sdk.models.FilterArgExpressionAnalysisResultSet attribute) (gemmapy.sdk.models.FilterArgExpressionExperiment attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject attribute) (gemmapy.sdk.models.GeeqValueObject attribute) (gemmapy.sdk.models.Gene attribute) (gemmapy.sdk.models.Gene1 attribute) (gemmapy.sdk.models.Gene2 attribute) (gemmapy.sdk.models.Gene3 attribute) (gemmapy.sdk.models.Gene4 attribute) (gemmapy.sdk.models.GeneArg attribute) (gemmapy.sdk.models.GeneElementExpressionsValueObject attribute) (gemmapy.sdk.models.GeneOntologyTermValueObject attribute) (gemmapy.sdk.models.GeneSetValueObject attribute) (gemmapy.sdk.models.GeneValueObject attribute) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.MeasurementValueObject attribute) (gemmapy.sdk.models.OneOfSearchResultValueObjectObjectResultObject attribute) (gemmapy.sdk.models.OntologyTermValueObject attribute) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject attribute) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.PhysicalLocationValueObject attribute) (gemmapy.sdk.models.Platform attribute) (gemmapy.sdk.models.Platform1 attribute) (gemmapy.sdk.models.Platform2 attribute) (gemmapy.sdk.models.Platform3 attribute) (gemmapy.sdk.models.Platform4 attribute) (gemmapy.sdk.models.Platform5 attribute) (gemmapy.sdk.models.PlatformArg attribute) (gemmapy.sdk.models.Probe attribute) (gemmapy.sdk.models.QuantitationType attribute) (gemmapy.sdk.models.QuantitationTypeArg attribute) (gemmapy.sdk.models.QuantitationTypeValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.QueryArg attribute) (gemmapy.sdk.models.ResponseDataObjectApiInfoValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListAnnotationSearchResultValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListArrayDesignValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListBioAssayValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListDifferentialExpressionAnalysisValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListExperimentExpressionLevelsValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListGeneOntologyTermValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListGeneValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListPhysicalLocationValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListTaxonValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectLong attribute) (gemmapy.sdk.models.ResponseDataObjectSetAnnotationValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectSetQuantitationTypeValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectSimpleSVDValueObject attribute) (gemmapy.sdk.models.ResponseErrorObject attribute) (gemmapy.sdk.models.SearchResultsResponseDataObject attribute) (gemmapy.sdk.models.SearchResultType attribute) (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.SearchResultValueObjectObject attribute) (gemmapy.sdk.models.SearchSettingsValueObject attribute) (gemmapy.sdk.models.SimpleSVDValueObject attribute) (gemmapy.sdk.models.SortArgArrayDesign attribute) (gemmapy.sdk.models.SortArgExpressionAnalysisResultSet attribute) (gemmapy.sdk.models.SortArgExpressionExperiment attribute) (gemmapy.sdk.models.SortArgTaxon attribute) (gemmapy.sdk.models.SortValueObject attribute) (gemmapy.sdk.models.StatementValueObject attribute) (gemmapy.sdk.models.Taxon attribute) (gemmapy.sdk.models.Taxon1 attribute) (gemmapy.sdk.models.Taxon2 attribute) (gemmapy.sdk.models.Taxon3 attribute) (gemmapy.sdk.models.Taxon4 attribute) (gemmapy.sdk.models.Taxon5 attribute) (gemmapy.sdk.models.Taxon6 attribute) (gemmapy.sdk.models.TaxonArg attribute) (gemmapy.sdk.models.TaxonValueObject attribute) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.VectorElementValueObject attribute) (gemmapy.sdk.models.WellComposedErrorBody attribute)

AuditEventValueObject (class in gemmapy.sdk.models) author_list (gemmapy.sdk.models.BibliographicReferenceValueObject property)

B

baseline_group (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) batch_confound (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) batch_corrected (gemmapy.sdk.models.GeeqValueObject property) batch_effect (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) batch_effect_statistics (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) bibliographic_phenotypes (gemmapy.sdk.models.BibliographicReferenceValueObject property) BibliographicPhenotypesValueObject (class in gemmapy.sdk.models)

BibliographicReferenceValueObject (class in gemmapy.sdk.models) bin (gemmapy.sdk.models.PhysicalLocationValueObject property) bio_assay_count (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) bio_assay_expression_levels (gemmapy.sdk.models.VectorElementValueObject property) bio_assay_ids (gemmapy.sdk.models.BioMaterialValueObject property) bio_assay_set_id (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) bio_material_ids (gemmapy.sdk.models.SimpleSVDValueObject property) BioAssayValueObject (class in gemmapy.sdk.models) BioMaterialValueObject (class in gemmapy.sdk.models) BioSequenceValueObject (class in gemmapy.sdk.models)

C

category (gemmapy.sdk.models.AnnotationSearchResultValueObject property) (gemmapy.sdk.models.CharacteristicValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) (gemmapy.sdk.models.StatementValueObject property) category_uri (gemmapy.sdk.models.AnnotationSearchResultValueObject property) (gemmapy.sdk.models.CharacteristicValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) (gemmapy.sdk.models.StatementValueObject property) CategoryWithUsageStatisticsValueObject (class in gemmapy.sdk.models) char_id (gemmapy.sdk.models.FactorValueValueObject property) characteristics (gemmapy.sdk.models.BioMaterialValueObject property) (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) CharacteristicValueObject (class in gemmapy.sdk.models) chemicals_terms (gemmapy.sdk.models.BibliographicReferenceValueObject property) chromosome (gemmapy.sdk.models.PhysicalLocationValueObject property) citation (gemmapy.sdk.models.BibliographicReferenceValueObject property) (gemmapy.sdk.models.CitationValueObject property) CitationValueObject (class in gemmapy.sdk.models) class_name (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject property)

class_uri (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject property) code (gemmapy.sdk.models.WellComposedErrorBody property) coefficient (gemmapy.sdk.models.ContrastResultValueObject property) color (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) comment (gemmapy.sdk.models.GeneOntologyTermValueObject property) common_name (gemmapy.sdk.models.TaxonValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property) CompositeSequenceArg (class in gemmapy.sdk.models) CompositeSequenceValueObject (class in gemmapy.sdk.models) ContrastResultValueObject (class in gemmapy.sdk.models) contrasts (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) corr_mat_issues (gemmapy.sdk.models.GeeqValueObject property) corrected_pvalue (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) curation_note (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property)

D

data (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ResponseDataObjectApiInfoValueObject property) (gemmapy.sdk.models.ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.ResponseDataObjectListAnnotationSearchResultValueObject property) (gemmapy.sdk.models.ResponseDataObjectListArrayDesignValueObject property) (gemmapy.sdk.models.ResponseDataObjectListBioAssayValueObject property) (gemmapy.sdk.models.ResponseDataObjectListDifferentialExpressionAnalysisValueObject property) (gemmapy.sdk.models.ResponseDataObjectListExperimentExpressionLevelsValueObject property) (gemmapy.sdk.models.ResponseDataObjectListGeneOntologyTermValueObject property) (gemmapy.sdk.models.ResponseDataObjectListGeneValueObject property) (gemmapy.sdk.models.ResponseDataObjectListPhysicalLocationValueObject property) (gemmapy.sdk.models.ResponseDataObjectListTaxonValueObject property) (gemmapy.sdk.models.ResponseDataObjectLong property) (gemmapy.sdk.models.ResponseDataObjectSetAnnotationValueObject property) (gemmapy.sdk.models.ResponseDataObjectSetQuantitationTypeValueObject property) (gemmapy.sdk.models.ResponseDataObjectSimpleSVDValueObject property) (gemmapy.sdk.models.SearchResultsResponseDataObject property) DatabaseEntryArg (class in gemmapy.sdk.models) DatabaseEntryValueObject (class in gemmapy.sdk.models) Dataset (class in gemmapy.sdk.models) Dataset1 (class in gemmapy.sdk.models)

Dataset10 (class in gemmapy.sdk.models) Dataset2 (class in gemmapy.sdk.models) Dataset3 (class in gemmapy.sdk.models) Dataset4 (class in gemmapy.sdk.models) Dataset5 (class in gemmapy.sdk.models) Dataset6 (class in gemmapy.sdk.models) Dataset7 (class in gemmapy.sdk.models) Dataset8 (class in gemmapy.sdk.models) Dataset9 (class in gemmapy.sdk.models) dataset_id (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject property) DatasetArg (class in gemmapy.sdk.models) description (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.BioMaterialValueObject property) (gemmapy.sdk.models.BioSequenceValueObject property) (gemmapy.sdk.models.CompositeSequenceValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) (gemmapy.sdk.models.GeneSetValueObject property) (gemmapy.sdk.models.QuantitationTypeValueObject property) design_element_name (gemmapy.sdk.models.VectorElementValueObject property) detail (gemmapy.sdk.models.AuditEventValueObject property) DifferentialExpressionAnalysisResultSetValueObject (class in gemmapy.sdk.models) DifferentialExpressionAnalysisResultValueObject (class in gemmapy.sdk.models) DifferentialExpressionAnalysisValueObject (class in gemmapy.sdk.models) DiffExResultSetSummaryValueObject (class in gemmapy.sdk.models) direction (gemmapy.sdk.models.SortValueObject property) docs (gemmapy.sdk.models.ApiInfoValueObject property) downregulated_count (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property)

E

ensembl_id (gemmapy.sdk.models.GeneValueObject property) error (gemmapy.sdk.models.ResponseErrorObject property) errors (gemmapy.sdk.models.WellComposedErrorBody property) event_type_name (gemmapy.sdk.models.AuditEventValueObject property) evidence_code (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) evidence_id (gemmapy.sdk.models.BibliographicPhenotypesValueObject property) experimental_factor_category (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) experimental_factor_id (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) experimental_factors (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) ExperimentalFactorValueObject (class in gemmapy.sdk.models) ExperimentExpressionLevelsValueObject (class in gemmapy.sdk.models) experiments (gemmapy.sdk.models.BibliographicReferenceValueObject property) expression_experiment_count (gemmapy.sdk.models.ArrayDesignValueObject property)

expression_experiment_ids (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) ExpressionExperimentSetValueObject (class in gemmapy.sdk.models) ExpressionExperimentValueObject (class in gemmapy.sdk.models) ExpressionExperimentWithSearchResultValueObject (class in gemmapy.sdk.models) external_database (gemmapy.sdk.models.DatabaseEntryValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.TaxonValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property) external_database_uri (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) external_databases (gemmapy.sdk.models.ApiInfoValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) external_references (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) external_uri (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) ExternalDatabaseValueObject (class in gemmapy.sdk.models)

F

factor_id (gemmapy.sdk.models.FactorValueValueObject property) factor_value (gemmapy.sdk.models.ContrastResultValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) factor_value_objects (gemmapy.sdk.models.BioMaterialValueObject property) factor_values (gemmapy.sdk.models.BioMaterialValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) factor_values_used (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) factor_values_used_by_experimental_factor_id (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) factors (gemmapy.sdk.models.BioMaterialValueObject property) FactorValueBasicValueObject (class in gemmapy.sdk.models) FactorValueValueObject (class in gemmapy.sdk.models) filter (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject property)

filter_properties() (gemmapy.GemmaPy method) FilterArgArrayDesign (class in gemmapy.sdk.models) FilterArgExpressionAnalysisResultSet (class in gemmapy.sdk.models) FilterArgExpressionExperiment (class in gemmapy.sdk.models) FilteredAndPaginatedResponseDataObjectArrayDesignValueObject (class in gemmapy.sdk.models) FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject (class in gemmapy.sdk.models) FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject (class in gemmapy.sdk.models) FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject (class in gemmapy.sdk.models) FilteredAndPaginatedResponseDataObjectGeneValueObject (class in gemmapy.sdk.models) fraction_repeats (gemmapy.sdk.models.BioSequenceValueObject property)

G

geeq (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) GeeqValueObject (class in gemmapy.sdk.models) GemmaPy (class in gemmapy) gemmapy.sdk.models module Gene (class in gemmapy.sdk.models) Gene1 (class in gemmapy.sdk.models) Gene2 (class in gemmapy.sdk.models) Gene3 (class in gemmapy.sdk.models) Gene4 (class in gemmapy.sdk.models) gene_expression_levels (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject property) gene_ids (gemmapy.sdk.models.GeneSetValueObject property) gene_name (gemmapy.sdk.models.BibliographicPhenotypesValueObject property) gene_ncbi (gemmapy.sdk.models.BibliographicPhenotypesValueObject property) gene_ncbi_id (gemmapy.sdk.models.GeneElementExpressionsValueObject property) gene_official_symbol (gemmapy.sdk.models.GeneElementExpressionsValueObject property) GeneArg (class in gemmapy.sdk.models) GeneElementExpressionsValueObject (class in gemmapy.sdk.models) GeneOntologyTermValueObject (class in gemmapy.sdk.models) general_type (gemmapy.sdk.models.QuantitationTypeValueObject property) genes (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) GeneSetValueObject (class in gemmapy.sdk.models) GeneValueObject (class in gemmapy.sdk.models) get_all_pages() (gemmapy.GemmaPy method) get_child_terms() (gemmapy.GemmaPy method) get_dataset_annotations() (gemmapy.GemmaPy method) get_dataset_differential_expression_analyses() (gemmapy.GemmaPy method) get_dataset_expression() (gemmapy.GemmaPy method) get_dataset_expression_for_genes() (gemmapy.GemmaPy method) get_dataset_object() (gemmapy.GemmaPy method) get_dataset_platforms() (gemmapy.GemmaPy method)

get_dataset_processed_expression() (gemmapy.GemmaPy method) get_dataset_quantitation_types() (gemmapy.GemmaPy method) get_dataset_raw_expression() (gemmapy.GemmaPy method) get_dataset_samples() (gemmapy.GemmaPy method) get_datasets() (gemmapy.GemmaPy method) get_datasets_by_ids() (gemmapy.GemmaPy method) get_differential_expression_values() (gemmapy.GemmaPy method) get_gene_go_terms() (gemmapy.GemmaPy method) get_gene_locations() (gemmapy.GemmaPy method) get_gene_probes() (gemmapy.GemmaPy method) get_genes() (gemmapy.GemmaPy method) get_platform_annotations() (gemmapy.GemmaPy method) get_platform_datasets() (gemmapy.GemmaPy method) get_platform_element_genes() (gemmapy.GemmaPy method) get_platforms() (gemmapy.GemmaPy method) get_platforms_by_ids() (gemmapy.GemmaPy method) get_result_sets() (gemmapy.GemmaPy method) get_taxa() (gemmapy.GemmaPy method) go_id (gemmapy.sdk.models.GeneOntologyTermValueObject property) group_by (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject property)

H

highlights (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.SearchResultValueObjectObject property)

I

id (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.AuditEventValueObject property) (gemmapy.sdk.models.BibliographicReferenceValueObject property) (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.BioMaterialValueObject property) (gemmapy.sdk.models.BioSequenceValueObject property) (gemmapy.sdk.models.CharacteristicValueObject property) (gemmapy.sdk.models.CitationValueObject property) (gemmapy.sdk.models.CompositeSequenceValueObject property) (gemmapy.sdk.models.ContrastResultValueObject property) (gemmapy.sdk.models.DatabaseEntryValueObject property) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) (gemmapy.sdk.models.GeeqValueObject property) (gemmapy.sdk.models.GeneSetValueObject property) (gemmapy.sdk.models.GeneValueObject property) (gemmapy.sdk.models.MeasurementValueObject property) (gemmapy.sdk.models.PhysicalLocationValueObject property) (gemmapy.sdk.models.QuantitationTypeValueObject property) (gemmapy.sdk.models.TaxonValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property)

is_background (gemmapy.sdk.models.QuantitationTypeValueObject property) is_background_subtracted (gemmapy.sdk.models.QuantitationTypeValueObject property) is_batch_corrected (gemmapy.sdk.models.QuantitationTypeValueObject property) is_masked_preferred (gemmapy.sdk.models.QuantitationTypeValueObject property) is_measurement (gemmapy.sdk.models.FactorValueValueObject property) is_merged (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) is_mergee (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) is_normalized (gemmapy.sdk.models.QuantitationTypeValueObject property) is_preferred (gemmapy.sdk.models.QuantitationTypeValueObject property) is_public (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) is_ratio (gemmapy.sdk.models.QuantitationTypeValueObject property) is_recomputed_from_raw_data (gemmapy.sdk.models.QuantitationTypeValueObject property) is_shared (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) is_subset (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) issue (gemmapy.sdk.models.BibliographicReferenceValueObject property)

L

label (gemmapy.sdk.models.GeneOntologyTermValueObject property) last_needs_attention_event (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) last_note_update_event (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) last_troubled_event (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) last_updated (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property)

length (gemmapy.sdk.models.BioSequenceValueObject property) limit (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject (class in gemmapy.sdk.models) LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject (class in gemmapy.sdk.models) local_name (gemmapy.sdk.models.GeneOntologyTermValueObject property) log_fold_change (gemmapy.sdk.models.ContrastResultValueObject property)

M

make_design() (gemmapy.GemmaPy method) max_results (gemmapy.sdk.models.SearchSettingsValueObject property) measurement (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) MeasurementValueObject (class in gemmapy.sdk.models) mesh_terms (gemmapy.sdk.models.BibliographicReferenceValueObject property) message (gemmapy.sdk.models.WellComposedErrorBody property)

metadata (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) modifiable (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) module gemmapy.sdk.models multifunctionality_rank (gemmapy.sdk.models.GeneValueObject property)

N

name (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.BioAssayValueObject property) (gemmapy.sdk.models.BioMaterialValueObject property) (gemmapy.sdk.models.BioSequenceValueObject property) (gemmapy.sdk.models.CompositeSequenceValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) (gemmapy.sdk.models.GeneSetValueObject property) (gemmapy.sdk.models.OntologyTermValueObject property) (gemmapy.sdk.models.QuantitationTypeValueObject property) ncbi_id (gemmapy.sdk.models.GeneValueObject property) (gemmapy.sdk.models.TaxonValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property) needs_attention (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) no_vectors (gemmapy.sdk.models.GeeqValueObject property)

note (gemmapy.sdk.models.AuditEventValueObject property) nucleotide (gemmapy.sdk.models.PhysicalLocationValueObject property) nucleotide_length (gemmapy.sdk.models.PhysicalLocationValueObject property) num_with_coexpression_analysis (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) num_with_differential_expression_analysis (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) number_of_array_designs (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) number_of_bio_assays (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) number_of_diff_expressed_probes (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) number_of_downregulated_probes (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) number_of_expression_experiments (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property) number_of_expression_experiments_for_technology_type (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) number_of_genes_analyzed (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) number_of_probes_analyzed (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) number_of_processed_expression_vectors (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) number_of_switched_expression_experiments (gemmapy.sdk.models.ArrayDesignValueObject property) number_of_upregulated_probes (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property)

O

object (gemmapy.sdk.models.StatementValueObject property) object_class (gemmapy.sdk.models.AnnotationValueObject property) object_id (gemmapy.sdk.models.StatementValueObject property) object_uri (gemmapy.sdk.models.StatementValueObject property) obsolete (gemmapy.sdk.models.GeneOntologyTermValueObject property) official_name (gemmapy.sdk.models.GeneValueObject property) official_symbol (gemmapy.sdk.models.GeneValueObject property) offset (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property)

OneOfSearchResultValueObjectObjectResultObject (class in gemmapy.sdk.models) ontology_id (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) OntologyTermValueObject (class in gemmapy.sdk.models) order_by (gemmapy.sdk.models.SortValueObject property) original_platform (gemmapy.sdk.models.BioAssayValueObject property) outlier (gemmapy.sdk.models.BioAssayValueObject property)

P

pages (gemmapy.sdk.models.BibliographicReferenceValueObject property) PaginatedResponseDataObjectCompositeSequenceValueObject (class in gemmapy.sdk.models) PaginatedResponseDataObjectExpressionExperimentValueObject (class in gemmapy.sdk.models) parent_terms (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.OntologyTermValueObject property) performer (gemmapy.sdk.models.AuditEventValueObject property) phenotypes_values (gemmapy.sdk.models.BibliographicPhenotypesValueObject property) PhysicalLocationValueObject (class in gemmapy.sdk.models) Platform (class in gemmapy.sdk.models) platform (gemmapy.sdk.models.SearchSettingsValueObject property) Platform1 (class in gemmapy.sdk.models) Platform2 (class in gemmapy.sdk.models) Platform3 (class in gemmapy.sdk.models) Platform4 (class in gemmapy.sdk.models) Platform5 (class in gemmapy.sdk.models) PlatformArg (class in gemmapy.sdk.models)

predicate (gemmapy.sdk.models.StatementValueObject property) predicate_uri (gemmapy.sdk.models.StatementValueObject property) predicted_outlier (gemmapy.sdk.models.BioAssayValueObject property) Probe (class in gemmapy.sdk.models) probe_id (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) probe_name (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) processing_date (gemmapy.sdk.models.BioAssayValueObject property) pub_accession (gemmapy.sdk.models.BibliographicReferenceValueObject property) public_quality_score (gemmapy.sdk.models.GeeqValueObject property) public_suitability_score (gemmapy.sdk.models.GeeqValueObject property) publication (gemmapy.sdk.models.BibliographicReferenceValueObject property) publication_date (gemmapy.sdk.models.BibliographicReferenceValueObject property) publisher (gemmapy.sdk.models.BibliographicReferenceValueObject property) pubmed_accession (gemmapy.sdk.models.CitationValueObject property) pubmed_url (gemmapy.sdk.models.CitationValueObject property) pvalue (gemmapy.sdk.models.ContrastResultValueObject property) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property)

Q

q_score_batch_info (gemmapy.sdk.models.GeeqValueObject property) q_score_outliers (gemmapy.sdk.models.GeeqValueObject property) q_score_platforms_tech (gemmapy.sdk.models.GeeqValueObject property) q_score_public_batch_confound (gemmapy.sdk.models.GeeqValueObject property) q_score_public_batch_effect (gemmapy.sdk.models.GeeqValueObject property) q_score_replicates (gemmapy.sdk.models.GeeqValueObject property) q_score_sample_correlation_variance (gemmapy.sdk.models.GeeqValueObject property) q_score_sample_mean_correlation (gemmapy.sdk.models.GeeqValueObject property) q_score_sample_median_correlation (gemmapy.sdk.models.GeeqValueObject property) QuantitationType (class in gemmapy.sdk.models) QuantitationTypeArg (class in gemmapy.sdk.models) QuantitationTypeValueObject (class in gemmapy.sdk.models)

QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject (class in gemmapy.sdk.models) QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject (class in gemmapy.sdk.models) QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject (class in gemmapy.sdk.models) QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject (class in gemmapy.sdk.models) query (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject property) (gemmapy.sdk.models.SearchSettingsValueObject property) QueryArg (class in gemmapy.sdk.models) qvalue (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property)

R

rank (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject property) release_url (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) release_version (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExternalDatabaseValueObject property) replicates_issues (gemmapy.sdk.models.GeeqValueObject property) representation (gemmapy.sdk.models.MeasurementValueObject property) (gemmapy.sdk.models.QuantitationTypeValueObject property) ResponseDataObjectApiInfoValueObject (class in gemmapy.sdk.models) ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject (class in gemmapy.sdk.models) ResponseDataObjectListAnnotationSearchResultValueObject (class in gemmapy.sdk.models) ResponseDataObjectListArrayDesignValueObject (class in gemmapy.sdk.models) ResponseDataObjectListBioAssayValueObject (class in gemmapy.sdk.models) ResponseDataObjectListDifferentialExpressionAnalysisValueObject (class in gemmapy.sdk.models) ResponseDataObjectListExperimentExpressionLevelsValueObject (class in gemmapy.sdk.models) ResponseDataObjectListGeneOntologyTermValueObject (class in gemmapy.sdk.models)

ResponseDataObjectListGeneValueObject (class in gemmapy.sdk.models) ResponseDataObjectListPhysicalLocationValueObject (class in gemmapy.sdk.models) ResponseDataObjectListTaxonValueObject (class in gemmapy.sdk.models) ResponseDataObjectLong (class in gemmapy.sdk.models) ResponseDataObjectSetAnnotationValueObject (class in gemmapy.sdk.models) ResponseDataObjectSetQuantitationTypeValueObject (class in gemmapy.sdk.models) ResponseDataObjectSimpleSVDValueObject (class in gemmapy.sdk.models) ResponseErrorObject (class in gemmapy.sdk.models) result_id (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.SearchResultValueObjectObject property) result_object (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.SearchResultValueObjectObject property) result_sets (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) result_type (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.SearchResultValueObjectObject property) result_types (gemmapy.sdk.models.SearchSettingsValueObject property) results (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject property) retracted (gemmapy.sdk.models.BibliographicReferenceValueObject property) (gemmapy.sdk.models.CitationValueObject property)

S

s_score_avg_platform_popularity (gemmapy.sdk.models.GeeqValueObject property) s_score_avg_platform_size (gemmapy.sdk.models.GeeqValueObject property) s_score_missing_values (gemmapy.sdk.models.GeeqValueObject property) s_score_platform_amount (gemmapy.sdk.models.GeeqValueObject property) s_score_platform_tech_multi (gemmapy.sdk.models.GeeqValueObject property) s_score_publication (gemmapy.sdk.models.GeeqValueObject property) s_score_raw_data (gemmapy.sdk.models.GeeqValueObject property) s_score_sample_size (gemmapy.sdk.models.GeeqValueObject property) sample (gemmapy.sdk.models.BioAssayValueObject property) scale (gemmapy.sdk.models.QuantitationTypeValueObject property) scientific_name (gemmapy.sdk.models.TaxonValueObject property) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject property) score (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.SearchResultValueObjectObject property) search_annotations() (gemmapy.GemmaPy method) search_gemma() (gemmapy.GemmaPy method) search_result (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) search_settings (gemmapy.sdk.models.SearchResultsResponseDataObject property) SearchResultsResponseDataObject (class in gemmapy.sdk.models) SearchResultType (class in gemmapy.sdk.models) SearchResultValueObjectExpressionExperimentValueObject (class in gemmapy.sdk.models) SearchResultValueObjectObject (class in gemmapy.sdk.models) SearchSettingsValueObject (class in gemmapy.sdk.models) second_factor_value (gemmapy.sdk.models.ContrastResultValueObject property) sequence (gemmapy.sdk.models.BioSequenceValueObject property) sequence_database_entry (gemmapy.sdk.models.BioSequenceValueObject property) sequence_paired_reads (gemmapy.sdk.models.BioAssayValueObject property) sequence_read_count (gemmapy.sdk.models.BioAssayValueObject property) sequence_read_length (gemmapy.sdk.models.BioAssayValueObject property) short_name (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) SimpleSVDValueObject (class in gemmapy.sdk.models) size (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) (gemmapy.sdk.models.GeneSetValueObject property) sort (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject property) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject property) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject property) SortArgArrayDesign (class in gemmapy.sdk.models) SortArgExpressionAnalysisResultSet (class in gemmapy.sdk.models) SortArgExpressionExperiment (class in gemmapy.sdk.models) SortArgTaxon (class in gemmapy.sdk.models) SortValueObject (class in gemmapy.sdk.models) source (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) source_experiment (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) statements (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) StatementValueObject (class in gemmapy.sdk.models) strand (gemmapy.sdk.models.PhysicalLocationValueObject property) subject (gemmapy.sdk.models.StatementValueObject property) subject_id (gemmapy.sdk.models.StatementValueObject property) subject_uri (gemmapy.sdk.models.StatementValueObject property) subset_factor (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) subset_factor_id (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) subset_factor_value (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject property) summary (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.FactorValueValueObject property) swagger_types (gemmapy.sdk.models.AnnotationSearchResultValueObject attribute) (gemmapy.sdk.models.AnnotationValueObject attribute) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.ApiInfoValueObject attribute) (gemmapy.sdk.models.ArrayDesignValueObject attribute) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.AuditEventValueObject attribute) (gemmapy.sdk.models.BibliographicPhenotypesValueObject attribute) (gemmapy.sdk.models.BibliographicReferenceValueObject attribute) (gemmapy.sdk.models.BioAssayValueObject attribute) (gemmapy.sdk.models.BioMaterialValueObject attribute) (gemmapy.sdk.models.BioSequenceValueObject attribute) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.CharacteristicValueObject attribute) (gemmapy.sdk.models.CitationValueObject attribute) (gemmapy.sdk.models.CompositeSequenceArg attribute) (gemmapy.sdk.models.CompositeSequenceValueObject attribute) (gemmapy.sdk.models.ContrastResultValueObject attribute) (gemmapy.sdk.models.DatabaseEntryArg attribute) (gemmapy.sdk.models.DatabaseEntryValueObject attribute) (gemmapy.sdk.models.Dataset attribute) (gemmapy.sdk.models.Dataset1 attribute) (gemmapy.sdk.models.Dataset10 attribute) (gemmapy.sdk.models.Dataset2 attribute) (gemmapy.sdk.models.Dataset3 attribute) (gemmapy.sdk.models.Dataset4 attribute) (gemmapy.sdk.models.Dataset5 attribute) (gemmapy.sdk.models.Dataset6 attribute) (gemmapy.sdk.models.Dataset7 attribute) (gemmapy.sdk.models.Dataset8 attribute) (gemmapy.sdk.models.Dataset9 attribute) (gemmapy.sdk.models.DatasetArg attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject attribute) (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject attribute) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject attribute) (gemmapy.sdk.models.ExperimentalFactorValueObject attribute) (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentSetValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentValueObject attribute) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject attribute) (gemmapy.sdk.models.ExternalDatabaseValueObject attribute) (gemmapy.sdk.models.FactorValueBasicValueObject attribute) (gemmapy.sdk.models.FactorValueValueObject attribute) (gemmapy.sdk.models.FilterArgArrayDesign attribute) (gemmapy.sdk.models.FilterArgExpressionAnalysisResultSet attribute) (gemmapy.sdk.models.FilterArgExpressionExperiment attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject attribute) (gemmapy.sdk.models.GeeqValueObject attribute) (gemmapy.sdk.models.Gene attribute) (gemmapy.sdk.models.Gene1 attribute) (gemmapy.sdk.models.Gene2 attribute) (gemmapy.sdk.models.Gene3 attribute) (gemmapy.sdk.models.Gene4 attribute) (gemmapy.sdk.models.GeneArg attribute) (gemmapy.sdk.models.GeneElementExpressionsValueObject attribute) (gemmapy.sdk.models.GeneOntologyTermValueObject attribute) (gemmapy.sdk.models.GeneSetValueObject attribute) (gemmapy.sdk.models.GeneValueObject attribute) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.MeasurementValueObject attribute) (gemmapy.sdk.models.OneOfSearchResultValueObjectObjectResultObject attribute) (gemmapy.sdk.models.OntologyTermValueObject attribute) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject attribute) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.PhysicalLocationValueObject attribute) (gemmapy.sdk.models.Platform attribute) (gemmapy.sdk.models.Platform1 attribute) (gemmapy.sdk.models.Platform2 attribute) (gemmapy.sdk.models.Platform3 attribute) (gemmapy.sdk.models.Platform4 attribute) (gemmapy.sdk.models.Platform5 attribute) (gemmapy.sdk.models.PlatformArg attribute) (gemmapy.sdk.models.Probe attribute) (gemmapy.sdk.models.QuantitationType attribute) (gemmapy.sdk.models.QuantitationTypeArg attribute) (gemmapy.sdk.models.QuantitationTypeValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.QueryArg attribute) (gemmapy.sdk.models.ResponseDataObjectApiInfoValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListAnnotationSearchResultValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListArrayDesignValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListBioAssayValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListDifferentialExpressionAnalysisValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListExperimentExpressionLevelsValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListGeneOntologyTermValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListGeneValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListPhysicalLocationValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectListTaxonValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectLong attribute) (gemmapy.sdk.models.ResponseDataObjectSetAnnotationValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectSetQuantitationTypeValueObject attribute) (gemmapy.sdk.models.ResponseDataObjectSimpleSVDValueObject attribute) (gemmapy.sdk.models.ResponseErrorObject attribute) (gemmapy.sdk.models.SearchResultsResponseDataObject attribute) (gemmapy.sdk.models.SearchResultType attribute) (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject attribute) (gemmapy.sdk.models.SearchResultValueObjectObject attribute) (gemmapy.sdk.models.SearchSettingsValueObject attribute) (gemmapy.sdk.models.SimpleSVDValueObject attribute) (gemmapy.sdk.models.SortArgArrayDesign attribute) (gemmapy.sdk.models.SortArgExpressionAnalysisResultSet attribute) (gemmapy.sdk.models.SortArgExpressionExperiment attribute) (gemmapy.sdk.models.SortArgTaxon attribute) (gemmapy.sdk.models.SortValueObject attribute) (gemmapy.sdk.models.StatementValueObject attribute) (gemmapy.sdk.models.Taxon attribute) (gemmapy.sdk.models.Taxon1 attribute) (gemmapy.sdk.models.Taxon2 attribute) (gemmapy.sdk.models.Taxon3 attribute) (gemmapy.sdk.models.Taxon4 attribute) (gemmapy.sdk.models.Taxon5 attribute) (gemmapy.sdk.models.Taxon6 attribute) (gemmapy.sdk.models.TaxonArg attribute) (gemmapy.sdk.models.TaxonValueObject attribute) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject attribute) (gemmapy.sdk.models.VectorElementValueObject attribute) (gemmapy.sdk.models.WellComposedErrorBody attribute)

T

Taxon (class in gemmapy.sdk.models) taxon (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.BioSequenceValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) (gemmapy.sdk.models.GeneSetValueObject property) (gemmapy.sdk.models.GeneValueObject property) (gemmapy.sdk.models.PhysicalLocationValueObject property) (gemmapy.sdk.models.SearchSettingsValueObject property) Taxon1 (class in gemmapy.sdk.models) Taxon2 (class in gemmapy.sdk.models) Taxon3 (class in gemmapy.sdk.models) Taxon4 (class in gemmapy.sdk.models) Taxon5 (class in gemmapy.sdk.models) Taxon6 (class in gemmapy.sdk.models) taxon_id (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) taxon_name (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) TaxonArg (class in gemmapy.sdk.models) TaxonValueObject (class in gemmapy.sdk.models) TaxonWithUsageStatisticsValueObject (class in gemmapy.sdk.models) technology_type (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) term (gemmapy.sdk.models.GeneOntologyTermValueObject property) term_name (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) term_uri (gemmapy.sdk.models.AnnotationValueObject property) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject property) threshold (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) title (gemmapy.sdk.models.BibliographicReferenceValueObject property) to_dict() (gemmapy.sdk.models.AnnotationSearchResultValueObject method) (gemmapy.sdk.models.AnnotationValueObject method) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject method) (gemmapy.sdk.models.ApiInfoValueObject method) (gemmapy.sdk.models.ArrayDesignValueObject method) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject method) (gemmapy.sdk.models.AuditEventValueObject method) (gemmapy.sdk.models.BibliographicPhenotypesValueObject method) (gemmapy.sdk.models.BibliographicReferenceValueObject method) (gemmapy.sdk.models.BioAssayValueObject method) (gemmapy.sdk.models.BioMaterialValueObject method) (gemmapy.sdk.models.BioSequenceValueObject method) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject method) (gemmapy.sdk.models.CharacteristicValueObject method) (gemmapy.sdk.models.CitationValueObject method) (gemmapy.sdk.models.CompositeSequenceArg method) (gemmapy.sdk.models.CompositeSequenceValueObject method) (gemmapy.sdk.models.ContrastResultValueObject method) (gemmapy.sdk.models.DatabaseEntryArg method) (gemmapy.sdk.models.DatabaseEntryValueObject method) (gemmapy.sdk.models.Dataset method) (gemmapy.sdk.models.Dataset1 method) (gemmapy.sdk.models.Dataset10 method) (gemmapy.sdk.models.Dataset2 method) (gemmapy.sdk.models.Dataset3 method) (gemmapy.sdk.models.Dataset4 method) (gemmapy.sdk.models.Dataset5 method) (gemmapy.sdk.models.Dataset6 method) (gemmapy.sdk.models.Dataset7 method) (gemmapy.sdk.models.Dataset8 method) (gemmapy.sdk.models.Dataset9 method) (gemmapy.sdk.models.DatasetArg method) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject method) (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject method) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject method) (gemmapy.sdk.models.ExperimentalFactorValueObject method) (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject method) (gemmapy.sdk.models.ExpressionExperimentSetValueObject method) (gemmapy.sdk.models.ExpressionExperimentValueObject method) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject method) (gemmapy.sdk.models.ExternalDatabaseValueObject method) (gemmapy.sdk.models.FactorValueBasicValueObject method) (gemmapy.sdk.models.FactorValueValueObject method) (gemmapy.sdk.models.FilterArgArrayDesign method) (gemmapy.sdk.models.FilterArgExpressionAnalysisResultSet method) (gemmapy.sdk.models.FilterArgExpressionExperiment method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject method) (gemmapy.sdk.models.GeeqValueObject method) (gemmapy.sdk.models.Gene method) (gemmapy.sdk.models.Gene1 method) (gemmapy.sdk.models.Gene2 method) (gemmapy.sdk.models.Gene3 method) (gemmapy.sdk.models.Gene4 method) (gemmapy.sdk.models.GeneArg method) (gemmapy.sdk.models.GeneElementExpressionsValueObject method) (gemmapy.sdk.models.GeneOntologyTermValueObject method) (gemmapy.sdk.models.GeneSetValueObject method) (gemmapy.sdk.models.GeneValueObject method) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject method) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject method) (gemmapy.sdk.models.MeasurementValueObject method) (gemmapy.sdk.models.OneOfSearchResultValueObjectObjectResultObject method) (gemmapy.sdk.models.OntologyTermValueObject method) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject method) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.PhysicalLocationValueObject method) (gemmapy.sdk.models.Platform method) (gemmapy.sdk.models.Platform1 method) (gemmapy.sdk.models.Platform2 method) (gemmapy.sdk.models.Platform3 method) (gemmapy.sdk.models.Platform4 method) (gemmapy.sdk.models.Platform5 method) (gemmapy.sdk.models.PlatformArg method) (gemmapy.sdk.models.Probe method) (gemmapy.sdk.models.QuantitationType method) (gemmapy.sdk.models.QuantitationTypeArg method) (gemmapy.sdk.models.QuantitationTypeValueObject method) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject method) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject method) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject method) (gemmapy.sdk.models.QueryArg method) (gemmapy.sdk.models.ResponseDataObjectApiInfoValueObject method) (gemmapy.sdk.models.ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.ResponseDataObjectListAnnotationSearchResultValueObject method) (gemmapy.sdk.models.ResponseDataObjectListArrayDesignValueObject method) (gemmapy.sdk.models.ResponseDataObjectListBioAssayValueObject method) (gemmapy.sdk.models.ResponseDataObjectListDifferentialExpressionAnalysisValueObject method) (gemmapy.sdk.models.ResponseDataObjectListExperimentExpressionLevelsValueObject method) (gemmapy.sdk.models.ResponseDataObjectListGeneOntologyTermValueObject method) (gemmapy.sdk.models.ResponseDataObjectListGeneValueObject method) (gemmapy.sdk.models.ResponseDataObjectListPhysicalLocationValueObject method) (gemmapy.sdk.models.ResponseDataObjectListTaxonValueObject method) (gemmapy.sdk.models.ResponseDataObjectLong method) (gemmapy.sdk.models.ResponseDataObjectSetAnnotationValueObject method) (gemmapy.sdk.models.ResponseDataObjectSetQuantitationTypeValueObject method) (gemmapy.sdk.models.ResponseDataObjectSimpleSVDValueObject method) (gemmapy.sdk.models.ResponseErrorObject method) (gemmapy.sdk.models.SearchResultsResponseDataObject method) (gemmapy.sdk.models.SearchResultType method) (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.SearchResultValueObjectObject method) (gemmapy.sdk.models.SearchSettingsValueObject method) (gemmapy.sdk.models.SimpleSVDValueObject method) (gemmapy.sdk.models.SortArgArrayDesign method) (gemmapy.sdk.models.SortArgExpressionAnalysisResultSet method) (gemmapy.sdk.models.SortArgExpressionExperiment method) (gemmapy.sdk.models.SortArgTaxon method) (gemmapy.sdk.models.SortValueObject method) (gemmapy.sdk.models.StatementValueObject method) (gemmapy.sdk.models.Taxon method) (gemmapy.sdk.models.Taxon1 method) (gemmapy.sdk.models.Taxon2 method) (gemmapy.sdk.models.Taxon3 method) (gemmapy.sdk.models.Taxon4 method) (gemmapy.sdk.models.Taxon5 method) (gemmapy.sdk.models.Taxon6 method) (gemmapy.sdk.models.TaxonArg method) (gemmapy.sdk.models.TaxonValueObject method) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject method) (gemmapy.sdk.models.VectorElementValueObject method) (gemmapy.sdk.models.WellComposedErrorBody method)

to_str() (gemmapy.sdk.models.AnnotationSearchResultValueObject method) (gemmapy.sdk.models.AnnotationValueObject method) (gemmapy.sdk.models.AnnotationWithUsageStatisticsValueObject method) (gemmapy.sdk.models.ApiInfoValueObject method) (gemmapy.sdk.models.ArrayDesignValueObject method) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject method) (gemmapy.sdk.models.AuditEventValueObject method) (gemmapy.sdk.models.BibliographicPhenotypesValueObject method) (gemmapy.sdk.models.BibliographicReferenceValueObject method) (gemmapy.sdk.models.BioAssayValueObject method) (gemmapy.sdk.models.BioMaterialValueObject method) (gemmapy.sdk.models.BioSequenceValueObject method) (gemmapy.sdk.models.CategoryWithUsageStatisticsValueObject method) (gemmapy.sdk.models.CharacteristicValueObject method) (gemmapy.sdk.models.CitationValueObject method) (gemmapy.sdk.models.CompositeSequenceArg method) (gemmapy.sdk.models.CompositeSequenceValueObject method) (gemmapy.sdk.models.ContrastResultValueObject method) (gemmapy.sdk.models.DatabaseEntryArg method) (gemmapy.sdk.models.DatabaseEntryValueObject method) (gemmapy.sdk.models.Dataset method) (gemmapy.sdk.models.Dataset1 method) (gemmapy.sdk.models.Dataset10 method) (gemmapy.sdk.models.Dataset2 method) (gemmapy.sdk.models.Dataset3 method) (gemmapy.sdk.models.Dataset4 method) (gemmapy.sdk.models.Dataset5 method) (gemmapy.sdk.models.Dataset6 method) (gemmapy.sdk.models.Dataset7 method) (gemmapy.sdk.models.Dataset8 method) (gemmapy.sdk.models.Dataset9 method) (gemmapy.sdk.models.DatasetArg method) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.DifferentialExpressionAnalysisResultValueObject method) (gemmapy.sdk.models.DifferentialExpressionAnalysisValueObject method) (gemmapy.sdk.models.DiffExResultSetSummaryValueObject method) (gemmapy.sdk.models.ExperimentalFactorValueObject method) (gemmapy.sdk.models.ExperimentExpressionLevelsValueObject method) (gemmapy.sdk.models.ExpressionExperimentSetValueObject method) (gemmapy.sdk.models.ExpressionExperimentValueObject method) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject method) (gemmapy.sdk.models.ExternalDatabaseValueObject method) (gemmapy.sdk.models.FactorValueBasicValueObject method) (gemmapy.sdk.models.FactorValueValueObject method) (gemmapy.sdk.models.FilterArgArrayDesign method) (gemmapy.sdk.models.FilterArgExpressionAnalysisResultSet method) (gemmapy.sdk.models.FilterArgExpressionExperiment method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject method) (gemmapy.sdk.models.GeeqValueObject method) (gemmapy.sdk.models.Gene method) (gemmapy.sdk.models.Gene1 method) (gemmapy.sdk.models.Gene2 method) (gemmapy.sdk.models.Gene3 method) (gemmapy.sdk.models.Gene4 method) (gemmapy.sdk.models.GeneArg method) (gemmapy.sdk.models.GeneElementExpressionsValueObject method) (gemmapy.sdk.models.GeneOntologyTermValueObject method) (gemmapy.sdk.models.GeneSetValueObject method) (gemmapy.sdk.models.GeneValueObject method) (gemmapy.sdk.models.LimitedResponseDataObjectAnnotationWithUsageStatisticsValueObject method) (gemmapy.sdk.models.LimitedResponseDataObjectArrayDesignWithUsageStatisticsValueObject method) (gemmapy.sdk.models.MeasurementValueObject method) (gemmapy.sdk.models.OneOfSearchResultValueObjectObjectResultObject method) (gemmapy.sdk.models.OntologyTermValueObject method) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject method) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.PhysicalLocationValueObject method) (gemmapy.sdk.models.Platform method) (gemmapy.sdk.models.Platform1 method) (gemmapy.sdk.models.Platform2 method) (gemmapy.sdk.models.Platform3 method) (gemmapy.sdk.models.Platform4 method) (gemmapy.sdk.models.Platform5 method) (gemmapy.sdk.models.PlatformArg method) (gemmapy.sdk.models.Probe method) (gemmapy.sdk.models.QuantitationType method) (gemmapy.sdk.models.QuantitationTypeArg method) (gemmapy.sdk.models.QuantitationTypeValueObject method) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject method) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectCategoryWithUsageStatisticsValueObject method) (gemmapy.sdk.models.QueriedAndFilteredResponseDataObjectTaxonWithUsageStatisticsValueObject method) (gemmapy.sdk.models.QueryArg method) (gemmapy.sdk.models.ResponseDataObjectApiInfoValueObject method) (gemmapy.sdk.models.ResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject method) (gemmapy.sdk.models.ResponseDataObjectListAnnotationSearchResultValueObject method) (gemmapy.sdk.models.ResponseDataObjectListArrayDesignValueObject method) (gemmapy.sdk.models.ResponseDataObjectListBioAssayValueObject method) (gemmapy.sdk.models.ResponseDataObjectListDifferentialExpressionAnalysisValueObject method) (gemmapy.sdk.models.ResponseDataObjectListExperimentExpressionLevelsValueObject method) (gemmapy.sdk.models.ResponseDataObjectListGeneOntologyTermValueObject method) (gemmapy.sdk.models.ResponseDataObjectListGeneValueObject method) (gemmapy.sdk.models.ResponseDataObjectListPhysicalLocationValueObject method) (gemmapy.sdk.models.ResponseDataObjectListTaxonValueObject method) (gemmapy.sdk.models.ResponseDataObjectLong method) (gemmapy.sdk.models.ResponseDataObjectSetAnnotationValueObject method) (gemmapy.sdk.models.ResponseDataObjectSetQuantitationTypeValueObject method) (gemmapy.sdk.models.ResponseDataObjectSimpleSVDValueObject method) (gemmapy.sdk.models.ResponseErrorObject method) (gemmapy.sdk.models.SearchResultsResponseDataObject method) (gemmapy.sdk.models.SearchResultType method) (gemmapy.sdk.models.SearchResultValueObjectExpressionExperimentValueObject method) (gemmapy.sdk.models.SearchResultValueObjectObject method) (gemmapy.sdk.models.SearchSettingsValueObject method) (gemmapy.sdk.models.SimpleSVDValueObject method) (gemmapy.sdk.models.SortArgArrayDesign method) (gemmapy.sdk.models.SortArgExpressionAnalysisResultSet method) (gemmapy.sdk.models.SortArgExpressionExperiment method) (gemmapy.sdk.models.SortArgTaxon method) (gemmapy.sdk.models.SortValueObject method) (gemmapy.sdk.models.StatementValueObject method) (gemmapy.sdk.models.Taxon method) (gemmapy.sdk.models.Taxon1 method) (gemmapy.sdk.models.Taxon2 method) (gemmapy.sdk.models.Taxon3 method) (gemmapy.sdk.models.Taxon4 method) (gemmapy.sdk.models.Taxon5 method) (gemmapy.sdk.models.Taxon6 method) (gemmapy.sdk.models.TaxonArg method) (gemmapy.sdk.models.TaxonValueObject method) (gemmapy.sdk.models.TaxonWithUsageStatisticsValueObject method) (gemmapy.sdk.models.VectorElementValueObject method) (gemmapy.sdk.models.WellComposedErrorBody method) total_elements (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectArrayDesignValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectDifferentialExpressionAnalysisResultSetValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.FilteredAndPaginatedResponseDataObjectGeneValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectCompositeSequenceValueObject property) (gemmapy.sdk.models.PaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentValueObject property) (gemmapy.sdk.models.QueriedAndFilteredAndPaginatedResponseDataObjectExpressionExperimentWithSearchResultValueObject property) trouble_details (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) troubled (gemmapy.sdk.models.ArrayDesignValueObject property) (gemmapy.sdk.models.ArrayDesignWithUsageStatisticsValueObject property) (gemmapy.sdk.models.ExpressionExperimentValueObject property) (gemmapy.sdk.models.ExpressionExperimentWithSearchResultValueObject property) tstat (gemmapy.sdk.models.ContrastResultValueObject property) type (gemmapy.sdk.models.BioSequenceValueObject property) (gemmapy.sdk.models.ExperimentalFactorValueObject property) (gemmapy.sdk.models.MeasurementValueObject property) (gemmapy.sdk.models.QuantitationTypeValueObject property)

U

unit (gemmapy.sdk.models.MeasurementValueObject property) upregulated_count (gemmapy.sdk.models.DiffExResultSetSummaryValueObject property) uri (gemmapy.sdk.models.ExternalDatabaseValueObject property) (gemmapy.sdk.models.GeneOntologyTermValueObject property) (gemmapy.sdk.models.OntologyTermValueObject property)

user_can_write (gemmapy.sdk.models.ExpressionExperimentSetValueObject property) user_flagged_outlier (gemmapy.sdk.models.BioAssayValueObject property) user_owned (gemmapy.sdk.models.ExpressionExperimentSetValueObject property)

V

value (gemmapy.sdk.models.AnnotationSearchResultValueObject property) (gemmapy.sdk.models.CharacteristicValueObject property) (gemmapy.sdk.models.FactorValueBasicValueObject property) (gemmapy.sdk.models.MeasurementValueObject property) value_id (gemmapy.sdk.models.CharacteristicValueObject property) value_uri (gemmapy.sdk.models.AnnotationSearchResultValueObject property) (gemmapy.sdk.models.CharacteristicValueObject property)

values (gemmapy.sdk.models.ExperimentalFactorValueObject property) variances (gemmapy.sdk.models.SimpleSVDValueObject property) vector_type (gemmapy.sdk.models.QuantitationTypeValueObject property) VectorElementValueObject (class in gemmapy.sdk.models) vectors (gemmapy.sdk.models.GeneElementExpressionsValueObject property) version (gemmapy.sdk.models.ApiInfoValueObject property) vmatrix (gemmapy.sdk.models.SimpleSVDValueObject property) volume (gemmapy.sdk.models.BibliographicReferenceValueObject property)

W

welcome (gemmapy.sdk.models.ApiInfoValueObject property)

WellComposedErrorBody (class in gemmapy.sdk.models)